SNP Profiles of SCA 6   View Data

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 1234567891011121314
_Input profile
CCAATTCCTTTTAAACTTAAGGAATTAA
1._SCA_6
_______AC___AA__
2._RUQ_234
_______AC___AA__
3._SCA_6
_______AC___AA__
4._SCA_6
_______AC___AA__
5._SCA_6
_______AC___AA__
6._SCA_6
_______AC___AA__
7._SCA_6
_______AC___AA__
8._GC-01-026-2-03
_______AC___AA__
9._RUQ_234
_______CC___AA__
10._SCA_6
_______AC___AA__
11._SCA_6
_______AC___AA__
12._SCA_6
_______AC___AA__
13._SCA_6
_______AC___AA__
14._SCA_6
_______AC___AA__
15._SCA_6
_______AC___AA__
16._SCA_6
_______AC___AA__
17._SCA_6
_______AC___AA__
18._SCA_6
_______AC___AA__
19._SCA_6
_______AC___AA__
20._SCA_6
_______AC___AA__
21._SCA_6
_______AC___AA__
22._SCA_6
_______AC___AA__
23._SCA_6
_______AC___AA__
24._SCA_6
_______AC___AA__
25._SCA_6
_______AC___AA__
26._SCA_6
_______AC___AA__
27._GC-01-26-2-03
_______AC___AA__
28._GC-01-026-2-03
_______AC___AA__
29._GC-01-026-2-03
_______AC___AA__
30._GC-01-026-2-03
_______AC___AA__
31._GC-01-026-2-03
_______AC___AA__
32._GC-01-026-2-03
_______AC___AA__
33._GC-01-026-2-03
_______AC___AA__
34._GC-01-026-2-03
_______AC___AA__
35._GC-01-026-2-03
_______AC___AA__
36._GC-01-026-2-03
_______AC___AA__
37._GC-01-026-2-03
_______AC___AA__
38._GC-01-026-2-03
_______AC___AA__
39._GC-01-26-2-03
_______AC___AA__
40._GC-01-26-2-03
_______AC___AA__
41._GC-01-26-2-03
_______AC___AA__
42._GC-01-026-2-03
_______AC___AA__
43._RUQ_234
_______AC___AA__
44._MITC-000343
_______AC___AA__
45._MITC-000344
_______AC___AA__
46._MITC-000345
_______AC___AA__
47._MITC-000347
_______AC___AA__
48._MITC-000348
_______AC___AA__
49._MITC-000349
_______AC___AA__
50._MITC-000376
_______AC___AA__
51._MITC-000452
_______AC___AA__
52._SCA6
_______CC___AA__
53._SCA_6_TC_(Penn_State)_Fld#_197_Plt#_6
_______AA___AA__
54._SCA_6_Fld#_16_Plt#_1
_______AA___AA__
 1516171819202122232425262728
_Input profile
AAAACTAACCAAAGCGAACCCCTTGGCC
1._SCA_6
_____AA_CG_CC____
2._RUQ_234
_____AA_CG_CC____
3._SCA_6
_____AA_CG_CC____
4._SCA_6
_____AA_CG_CC____
5._SCA_6
_____AA_CG_CC____
6._SCA_6
_____AA_CG_CC____
7._SCA_6
_____AA_CG_CC____
8._GC-01-026-2-03
AA____AA_CG_CCCC___
9._RUQ_234
AA____AA_CG_CCCC___
10._SCA_6
_____AA_CG_CC____
11._SCA_6
_____AA_CG_CC____
12._SCA_6
_____AA_CG_CC____
13._SCA_6
_____AA_CG_CC____
14._SCA_6
_____AA_CG_CC____
15._SCA_6
_____AA_CG_CC____
16._SCA_6
_____AA_CG_CC____
17._SCA_6
_____AA_CG_CC____
18._SCA_6
_____AA_CG_CC____
19._SCA_6
_____AA_CG_CC____
20._SCA_6
_____AA_CG_CC____
21._SCA_6
_____AA_CG_CC____
22._SCA_6
_____AA_CG_CC____
23._SCA_6
_____AA_CG_CC____
24._SCA_6
_____AA_CG_CC____
25._SCA_6
_____AA_CG_CC____
26._SCA_6
_____AA_CG_CC____
27._GC-01-26-2-03
AA____AA_CG_CCCC___
28._GC-01-026-2-03
AA____AA_CG_CCCC___
29._GC-01-026-2-03
AA____AA_CG_CCCC___
30._GC-01-026-2-03
AA____AA_CG_CCCC___
31._GC-01-026-2-03
AA____AA_CG_CCCC___
32._GC-01-026-2-03
AA____AA_CG_CCCC___
33._GC-01-026-2-03
AA____AA_CG_CCCC___
34._GC-01-026-2-03
AA____AA_CG_CCCC___
35._GC-01-026-2-03
AA____AA_CG_CCCC___
36._GC-01-026-2-03
AA____AA_CG_CCCC___
37._GC-01-026-2-03
AA____AA_CG_CCCC___
38._GC-01-026-2-03
AA____AA_CG_CCCC___
39._GC-01-26-2-03
AA____AA_CG_CCCC___
40._GC-01-26-2-03
AA____AA_CG_CCCC___
41._GC-01-26-2-03
_____AA_CG_CCCC___
42._GC-01-026-2-03
GG____AA_CG_CCCC___
43._RUQ_234
AA____AA_CG_CCGG___
44._MITC-000343
AA____AA_CG_CCGG___
45._MITC-000344
AA____AA_CG_CCGG___
46._MITC-000345
AA____AA_CG_CCGG___
47._MITC-000347
AA____AA_CG_CCGG___
48._MITC-000348
AA____AA_CG_CCGG___
49._MITC-000349
AA____AA_CG_CCGG___
50._MITC-000376
AA____AA_CG_CCGG___
51._MITC-000452
AA____AA_CG_CCGG___
52._SCA6
_______CG_CCCC___
53._SCA_6_TC_(Penn_State)_Fld#_197_Plt#_6
AG____AC_CG_ACAG___
54._SCA_6_Fld#_16_Plt#_1
AG____AC_CG_ACAG___
 2930313233343536373839404142
_Input profile
AGCCCTGGAACCTTCCTTCCCCGGGGAA
1._SCA_6
AG__GG______CC__AA
2._RUQ_234
AG__GG______CC__AA
3._SCA_6
AG__GG______CC__AA
4._SCA_6
AG__GG______CC__AA
5._SCA_6
AG__GG______CC__AA
6._SCA_6
AG__GG______CC__AA
7._SCA_6
AG__GG______CC__AA
8._GC-01-026-2-03
AA__GGAA__CC_CCCCGG_AA
9._RUQ_234
__CTGGAA__CC__CC-_AA
10._SCA_6
AA__GG______CC__AA
11._SCA_6
AA__GG______CC__AA
12._SCA_6
AA__GG______CC__AA
13._SCA_6
AA__GG______CC__AA
14._SCA_6
AA__GG______CC__AA
15._SCA_6
AA__GG______CC__AA
16._SCA_6
AA__GG______CC__AA
17._SCA_6
AA__GG______CC__AA
18._SCA_6
AA__GG______CC__AA
19._SCA_6
AA__GG______CC__AA
20._SCA_6
AA__GG______CC__AA
21._SCA_6
AA__GG______CC__AA
22._SCA_6
AA__GG______CC__AA
23._SCA_6
AA__GG______CC__AA
24._SCA_6
AA__GG______CC__AA
25._SCA_6
AA__GG______CC__AA
26._SCA_6
AA__GG______CC__AA
27._GC-01-26-2-03
AA_TTGGAA__CC_CCCCGG_AA
28._GC-01-026-2-03
AA_TTGGAA__CC_CCCCGG_AA
29._GC-01-026-2-03
AA_TTGGAA__CC_CCCCGG_AA
30._GC-01-026-2-03
AA_TTGGAA__CC_CCCCGG_AA
31._GC-01-026-2-03
AA_TTGGAA__CC_CCCCGG_AA
32._GC-01-026-2-03
AA_TTGGAA__CC_CCCCGG_AA
33._GC-01-026-2-03
AA_TTGGAA__CC_CCCCGG_AA
34._GC-01-026-2-03
AA_TTGGAA__CC_CCCCGG_AA
35._GC-01-026-2-03
AA_TTGGAA__CC_CCCCGG_AA
36._GC-01-026-2-03
AA_TTGGAA__CC_CCCCGG_AA
37._GC-01-026-2-03
AA_TTGGAA__CC_CCCCGG_AA
38._GC-01-026-2-03
AA_TTGGAA__CC_CCCCGG_AA
39._GC-01-26-2-03
AA_TTGGAA__CC_CCCCGG_AA
40._GC-01-26-2-03
AA_TTGGAA__CC_CCCCGG_AA
41._GC-01-26-2-03
AA_TTGGAA__CC_CCCCGG_AA
42._GC-01-026-2-03
AA_TTGGAA__CC_CCCCGG_AA
43._RUQ_234
___CCAA__CC_GGGGGG_AA
44._MITC-000343
___CCAA__CC_GGGGGG_AA
45._MITC-000344
___CCAA__CC_GGGGGG_AA
46._MITC-000345
___CCAA__CC_GGGGGG_AA
47._MITC-000347
___CCAA__CC_GGGGGG_AA
48._MITC-000348
___CCAA__CC_GGGGGG_AA
49._MITC-000349
___CCAA__CC_GGGGGG_AA
50._MITC-000376
___CCAA__CC_GGGGGG_AA
51._MITC-000452
___CCAA__CC_GGGGGG_AA
52._SCA6
__________GG___
53._SCA_6_TC_(Penn_State)_Fld#_197_Plt#_6
___CCAG__AC_CGCGAG_AG
54._SCA_6_Fld#_16_Plt#_1
___CCAG__AC_CGCGAG_AG
 4344454647484950515253545556
_Input profile
CCTTAACCGGCTCCGGAAGGGGATAAAA
1._SCA_6
____GG_CC__GG____
2._RUQ_234
____GG_CC__GG____
3._SCA_6
____GG_CC__GG____
4._SCA_6
____GG_CC__GG____
5._SCA_6
____GG_CC__GG____
6._SCA_6
____GG_CC__GG____
7._SCA_6
____GG_CC__GG____
8._GC-01-026-2-03
CC___GG_CC__GG____
9._RUQ_234
CC________GG____
10._SCA_6
____GG_CC__GG____
11._SCA_6
____GG_CC__GG____
12._SCA_6
____GG_CC__GG____
13._SCA_6
____GG_CC__GG____
14._SCA_6
____GG_CC__GG____
15._SCA_6
____GG_CC__GG____
16._SCA_6
____GG_CC__GG____
17._SCA_6
____GG_CC__GG____
18._SCA_6
____GG_CC__GG____
19._SCA_6
____GG_CC__GG____
20._SCA_6
____GG_CC__GG____
21._SCA_6
____GG_CC__GG____
22._SCA_6
____GG_CC__GG____
23._SCA_6
____GG_CC__GG____
24._SCA_6
____GG_CC__GG____
25._SCA_6
____GG_CC__GG____
26._SCA_6
____GG_CC__GG____
27._GC-01-26-2-03
CC___GG_CC__GG____
28._GC-01-026-2-03
CC___GG_CC__GG____
29._GC-01-026-2-03
CC___GG_CC__GG____
30._GC-01-026-2-03
CC___GG_CC__GG____
31._GC-01-026-2-03
CC___GG_CC__GG____
32._GC-01-026-2-03
CC___GG_CC__GG____
33._GC-01-026-2-03
CC___GG_CC__GG____
34._GC-01-026-2-03
CC___GG_CC__GG____
35._GC-01-026-2-03
CC___GG_CC__GG____
36._GC-01-026-2-03
CC___GG_CC__GG____
37._GC-01-026-2-03
CC___GG_CC__GG____
38._GC-01-026-2-03
CC___GG_CC__GG____
39._GC-01-26-2-03
CC___GG_CC__GG____
40._GC-01-26-2-03
CC___GG_CC__GG____
41._GC-01-26-2-03
CC___GG_CC__GG____
42._GC-01-026-2-03
CC___GG_CC__GG____
43._RUQ_234
____GG____CC____
44._MITC-000343
____GG____CC____
45._MITC-000344
____GG____CC____
46._MITC-000345
____GG____CC____
47._MITC-000347
____GG____CC____
48._MITC-000348
____GG____CC____
49._MITC-000349
____GG____CC____
50._MITC-000376
____GG____CC____
51._MITC-000452
____GG____CC____
52._SCA6
______________
53._SCA_6_TC_(Penn_State)_Fld#_197_Plt#_6
____AG____AC____
54._SCA_6_Fld#_16_Plt#_1
____AG____AC____
 575859           
_Input profile
CCCTAAX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._RUQ_234
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
5._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
6._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
7._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
8._GC-01-026-2-03
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
9._RUQ_234
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
10._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
11._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
12._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
13._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
14._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
15._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
16._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
17._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
18._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
19._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
20._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
21._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
22._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
23._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
24._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
25._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
26._SCA_6
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
27._GC-01-26-2-03
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
28._GC-01-026-2-03
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
29._GC-01-026-2-03
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
30._GC-01-026-2-03
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
31._GC-01-026-2-03
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
32._GC-01-026-2-03
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
33._GC-01-026-2-03
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
34._GC-01-026-2-03
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
35._GC-01-026-2-03
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
36._GC-01-026-2-03
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
37._GC-01-026-2-03
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
38._GC-01-026-2-03
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
39._GC-01-26-2-03
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
40._GC-01-26-2-03
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
41._GC-01-26-2-03
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
42._GC-01-026-2-03
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
43._RUQ_234
GG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
44._MITC-000343
GG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
45._MITC-000344
GG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
46._MITC-000345
GG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
47._MITC-000347
GG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
48._MITC-000348
GG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
49._MITC-000349
GG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
50._MITC-000376
GG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
51._MITC-000452
GG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
52._SCA6
GG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
53._SCA_6_TC_(Penn_State)_Fld#_197_Plt#_6
CG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
54._SCA_6_Fld#_16_Plt#_1
CG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: SCA_6 RUQ_234B

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

1._SCA_6

identical
13 shared markers

Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

2._SCA_6 RUQ_234

identical
13 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

3._SCA_6

identical
13 shared markers

Cocoa Research Institute of Ghana (CRIG), Ghana
Location: P76 278
 Dapeng Zhang, 2016

4._SCA_6

identical
13 shared markers

Cocoa Research Institute of Ghana (CRIG), Ghana
Location: P75 279
 Dapeng Zhang, 2016

5._SCA_6

identical
13 shared markers

Indonesian Coffee and Cocoa Research Institute (ICCRI), Indonesia
Location: KW 268 I-022
 Dapeng Zhang, 2016

6._SCA_6

identical
13 shared markers

Malaysian Cocoa Board (MCB), Malaysia
Location: C0267
 Dapeng Zhang, 2016

7._SCA_6

identical
13 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 644
 Dapeng Zhang, 2016

8._SCA_6 GC-01-026-2-03

97.5 %
20 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

9._SCA_6 RUQ_234

96.9 %
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

10._SCA_6

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1203 9
 Dapeng Zhang, 2016

11._SCA_6

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1203 16 > F
 Dapeng Zhang, 2016

12._SCA_6

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1203 11 > F
 Dapeng Zhang, 2016

13._SCA_6

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1203 1 > FP
 Dapeng Zhang, 2016

14._SCA_6

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1203 15
 Dapeng Zhang, 2016

15._SCA_6

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1203 14
 Dapeng Zhang, 2016

16._SCA_6

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1203 13
 Dapeng Zhang, 2016

17._SCA_6

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1203 10
 Dapeng Zhang, 2016

18._SCA_6

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1203 7 > FP
 Dapeng Zhang, 2016

19._SCA_6

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1203 8
 Dapeng Zhang, 2016

20._SCA_6

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1203 6
 Dapeng Zhang, 2016

21._SCA_6

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1203 5
 Dapeng Zhang, 2016

22._SCA_6

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1203 4
 Dapeng Zhang, 2016

23._SCA_6

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1203 1
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

24._SCA_6

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1203 2
 Dapeng Zhang, 2016

25._SCA_6

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1203 2
 Dapeng Zhang, 2016

26._SCA_6

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1203 3
 Dapeng Zhang, 2016

27._SCA_6 GC-01-26-2-03

95.2 %
21 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 3, Tree: PL7
Notes: PL7 FP3
 Mars, 2018

28._SCA_6 GC-01-026-2-03

95.2 %
21 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

29._SCA_6 GC-01-026-2-03

95.2 %
21 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

30._SCA_6 GC-01-026-2-03

95.2 %
21 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

31._SCA_6 GC-01-026-2-03

95.2 %
21 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

32._SCA_6 GC-01-026-2-03

95.2 %
21 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

33._SCA_6 GC-01-026-2-03

95.2 %
21 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

34._SCA_6 GC-01-026-2-03

95.2 %
21 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

35._SCA_6 GC-01-026-2-03

95.2 %
21 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

36._SCA_6 GC-01-026-2-03

95.2 %
21 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

37._SCA_6 GC-01-026-2-03

95.2 %
21 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

38._SCA_6 GC-01-026-2-03

95.2 %
21 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: Dead
 Mars, 2018

39._SCA_6 GC-01-26-2-03

95.2 %
21 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 3, Tree: PL16
Notes: PL16 FP4
 Mars, 2018

40._SCA_6 GC-01-26-2-03

95.2 %
21 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 3, Tree: PL1
Notes: PL1 FP1
 Mars, 2018

41._SCA_6 GC-01-26-2-03

95 %
20 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 3, Tree: PL11
Notes: PL11 FP2
 Mars, 2018

42._SCA_6 GC-01-026-2-03

90.5 %
21 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

43._SCA_6 RUQ_234

64.7 %
17 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

44._SCA_6 MITC-000343

64.7 %
17 shared markers

USDA-SHRS, United States of America
 Mars, 2018

45._SCA_6 MITC-000344

64.7 %
17 shared markers

USDA-SHRS, United States of America
 Mars, 2018

46._SCA_6 MITC-000345

64.7 %
17 shared markers

USDA-SHRS, United States of America
 Mars, 2018

47._SCA_6 MITC-000347

64.7 %
17 shared markers

USDA-SHRS, United States of America
 Mars, 2018

48._SCA_6 MITC-000348

64.7 %
17 shared markers

USDA-SHRS, United States of America
 Mars, 2018

49._SCA_6 MITC-000349

64.7 %
17 shared markers

USDA-SHRS, United States of America
 Mars, 2018

50._SCA_6 MITC-000376

64.7 %
17 shared markers

USDA-SHRS, United States of America
 Mars, 2018

51._SCA_6 MITC-000452

64.7 %
17 shared markers

USDA-SHRS, United States of America
 Mars, 2018

52._SCA_6 SCA6

64.3 %
7 shared markers

Center for Forestry Research and Technology Transfer, Vietnam
Location: CEFORTT
 Jocelyn De Wever et al., 2019

53._SCA_6 SCA_6_TC_(Penn_State)_Fld#_197_Plt#_6

47.1 %
17 shared markers

USDA-TARS, United States of America
Location: Field: 197, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

54._SCA_6 SCA_6_Fld#_16_Plt#_1

47.1 %
17 shared markers

USDA-TARS, United States of America
Location: Field: 16, Tree: 1
 Mars, 2018

 


  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP33 4TcSNP49 5TcSNP52
6TcSNP131 7TcSNP143 8TcSNP144 9TcSNP176 10TcSNP189
11TcSNP194 12TcSNP230 13TcSNP290 14TcSNP305 15TcSNP329
16TcSNP363 17TcSNP421 18TcSNP519 19TcSNP522 20TcSNP529
21TcSNP546 22TcSNP577 23TcSNP589 24TcSNP591 25TcSNP602
26TcSNP640 27TcSNP642 28TcSNP644 29TcSNP645 30TcSNP660
31TcSNP702 32TcSNP723 33TcSNP731 34TcSNP739 35TcSNP800
36TcSNP823 37TcSNP835 38TcSNP836 39TcSNP872 40TcSNP899
41TcSNP945 42TcSNP998 43TcSNP999 44TcSNP1010 45TcSNP1019
46TcSNP1053 47TcSNP1062 48TcSNP1112 49TcSNP1144 50TcSNP1205
51TcSNP1230 52TcSNP1253 53TcSNP1275 54TcSNP1293 55TcSNP1401
56TcSNP1404 57TcSNP1458 58TcSNP1524 59TcSNP1527